SNAP-ALIGNER(1) User Commands SNAP-ALIGNER(1)

snap-aligner - scalable nucleotide alignment program

snap-aligner <command> [<options>]

Welcome to SNAP version 2.0.3.

build a genome index
align single-end reads
align paired-end reads
run in daemon mode--accept commands remotely

Type a command without arguments to see its help.

January 2024 snap-aligner 2.0.3